Biodesign Directory Profile

Selected Publications

2006

• Cromie, Michael J, Shi, Yixin, Latifi, Tammy, Groisman, Eduardo A. An RNA sensor for intracellular Mg2+. Cell (2006).
• Naito, Mariko, Sakai, Eiko, Shi, Yixin, Ideguchi, Hiroshi, Shoji, Mikio, Ohara, Naoya, Yamamoto, Kenji, Nakayama, Koji. Porphyromonas gingivalis-induced platelet aggregation in plasma depends on Hgp44 adhesin but not Rgp proteinase. Mol Microbiol (2006).

2005

• Fong-Fu, Hsu, Turk, John, Rhoades, Elizabeth R, Russell, David G, Shi, Yixin, Groisman, Eduardo A. Structural Characterization of Cardiolipin by Tandem Quadrupole and Multiple-stage Quadrupole Ion-Trap Mass Spectrometry with Electrospray Ionization. J Am Soc Mass Spectrom (2005).

2004

• Fong-Fu, Hsu, Turk, John, Shi, Yixin, Groisman, Eduardo A. Characterization of acylphosphatidylglycerols from Salmonella typhimurium by tandem mass spectrometry with electrospray ionization. J Am Soc Mass Spectrom (2004).
• Shi, Yixin, Cromie, Michael J, Fong-Fu, Hsu, Turk, John, Groisman, Eduardo A. PhoP-regulated Salmonella resistance to the antimicrobial peptides magainin 2 and polymyxin B. Molecular Microbiology (2004).
• Shi, Yixin, Latifi, Tammy, Cromie, Michael J, Groisman, Eduardo A. Transcriptional control of the antimicrobial peptide resistance ugtL gene by the salmonella PhoP and SlyA regulatory proteins. The Journal of Biological Chemistry (2004).

2002

• Shoji, M, Ratnayake, D B, Shi, Yixin, Kadowaki, T, Yamamoto, K, Yoshimura, F, Akamine, A, Curtis, M A, Nakayama, K. Construction and characterization of a nonpigmented mutant of Porphyromonas gingivalis: cell surface polysaccharide as an anchorage for gingipains. Microbiology (2002).

2000

• Atnayake, D B, Wai, S N, Shi, Yixin, Amako, K, Nakayama, H, Nakayama, K. Ferritin from the obligate anaerobe Porphyromonas gingivalis: purification, gene cloning and mutant studies. Microbiology (2000).
• Kadowaki, T, Nakayama, K, Okamoto, K, Abe, N, Baba, A, Shi, Yixin, Ratnayake, D B, Yamamoto, K. Porphyromonas gingivalis proteinases as virulence determinants in progression of periodontal diseases. (2000).
• Kong, W, Shiota, S, Shi, Yixin, Nakayama, H, Nakayama, K. A novel peroxiredoxin of the plant Sedum lineare is a homologue of Escherichia coli bacterioferritin co-migratory protein (Bcp). Biochem. J (2000).
• Shi, Yixin, Kong, Wei, Nakayama, Koji. Human lactoferrin binds and removes the hemoglobin receptor protein of the periodontopathogen Porphyromonas gingivalis. The Journal of Biololical Chemistry (2000).